Cloud Computing

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  1. Newbler

    I suggest we incorporate the Roche/454 denovo/mapping assembler Newbler into the image.

    19 votes
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      1 comment  ·  Admin →

    • Short Read Mappers

      I suggest we incorporate small read mappers into the JCVI Cloud BioLinux package. There are so many, maybe they each belong as a seperate suggestion. I will start with my two favorites:

      MAQ - http://maq.sourceforge.net/
      SOAP - http://soap.genomics.org.cn/

      14 votes
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        0 comments  ·  Admin →

      • Perhaps you could set up a 64-bit Ubuntu repository to facilitate installation locally?

        10 votes
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          2 comments  ·  Admin →

        • Icorporate tools for HTS analysis

          Such as aligners: BWA, Bowtie, RUM
          downstream: samtools, Piccard, bedtools

          7 votes
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            0 comments  ·  Admin →

          • Please can you make a 64-bit ISO that I can use to install all this stuff on my local box?

            I can't really afford the money to subscribe to Amazon privately but I have a pretty powerful i7 machine at home with tons of RAM and disk. I would love to be able to just install your Ubuntu distro on it to save myself the pain of tracking down all the 64-bit packages manually and setting them up by hand. Any chance you might offer this one day? If you do already (I spent hours searching for an ISO) could you post a download link?

            6 votes
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              2 comments  ·  Admin →

            • Would be great if we could get the Cloudbiolinux source onto Github

              5 votes
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                0 comments  ·  Admin →

              • I don´t have any idea

                or so

                2 votes
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                  0 comments  ·  Admin →

                • Privacy policies.

                  I suggest publishing privacy policies. That will promote usage. jdmendez

                  1 vote
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                    1 comment  ·  Admin →

                  • Install RubyGems

                    1 vote
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                      0 comments  ·  Admin →

                    • think about about making this an EBS-backed AMI or at least having two versions

                      EBS-backed AMIs have more flexibility and re-bundling is a lot easier

                      1 vote
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                        0 comments  ·  Admin →

                      • i have an idea to make cloud as enhance more, in security issues and less power usage,if we add DNA computing in cloud computing.is this cor

                        i have an idea to make cloud as enhance more, in security issues and less power usage,if we add DNA computing in cloud computing.is this correct idea or it makes someother issues.

                        1 vote
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                          0 comments  ·  Admin →
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                        Cloud Computing

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